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GenBank Identifier | RefSeq Acc. | Name |
56160595 | AC_000010.1 | Simian adenovirus 21 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
309 | + | 1654 | 87 | 23.5 | -25.3 | AP_000262 | 5' arm 3' arm | ||
310 | + | 6356 | 90 | 23 | -24.4 | AP_000266 | 5' arm 3' arm | ||
311 | + | 7919 | 90 | 22.5 | -19.7 | AP_000266 | 5' arm 3' arm | ||
312 | + | 8510 | 89 | 20 | -26 | AP_000266 | 5' arm 3' arm | ||
313 | + | 9616 | 89 | 20 | -21.4 | AP_000267 | 5' arm 3' arm | ||
314 | + | 10145 | 86 | 21 | -22.83 | AP_000267 | 5' arm 3' arm | ||
315 | + | 10630 | 88 | 22 | -20.7 | 5' arm 3' arm | |||
316 | + | 10722 | 86 | 20.5 | -22.1 | 5' arm 3' arm | |||
317 | + | 11193 | 89 | 20.5 | -22.3 | AP_000268 | 5' arm 3' arm | ||
318 | + | 12453 | 86 | 20 | -22.4 | AP_000269 | 5' arm 3' arm | ||
319 | + | 13768 | 81 | 20.5 | -20.7 | AP_000269 | 5' arm 3' arm | ||
320 | + | 15699 | 90 | 22.5 | -27.2 | AP_000271 | 5' arm 3' arm | ||
321 | + | 17453 | 90 | 19.5 | -22.4 | AP_000273 | 5' arm 3' arm | ||
322 | + | 18759 | 81 | 22.5 | -21.5 | AP_000275 | 5' arm 3' arm | ||
323 | + | 24757 | 84 | 19.5 | -20.3 | AP_000278 | 5' arm 3' arm | ||
324 | + | 25029 | 81 | 21 | -25.9 | AP_000278 | 5' arm 3' arm | ||
325 | + | 27136 | 88 | 20 | -21.9 | AP_000281 | 5' arm 3' arm | ||
326 | + | 27475 | 89 | 19.5 | -21 | AP_000282 | 5' arm 3' arm | ||
327 | + | 33625 | 90 | 22 | -24 | AP_000293 | 5' arm 3' arm | ||
328 | - | 568 | 88 | 19 | -22.8 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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