miRNA display CGI


Results 1 - 20 of 201 are showing below:
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GenBank Identifier RefSeq Acc. Name
29565766 NC_004680.1 Mycobacteriophage Che8 virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
18199 - 32364 90 24 -19.4 NP_817382 5' arm      3' arm
18106 + 22164 87 24 -19.4 NP_817359 5' arm      3' arm
18238 - 55211 90 24 -19.4 NP_817442 5' arm      3' arm
18072 + 8379 90 21.5 -19.5 5' arm      3' arm
18102 + 20377 84 19.5 -19.6 NP_817358 5' arm      3' arm
18067 + 7316 87 22 -19.7 NP_817348 5' arm      3' arm
18157 + 51163 89 19.5 -19.7 NP_817428 5' arm      3' arm
18081 + 11225 89 21.5 -19.7 NP_817352 5' arm      3' arm
18125 + 30494 89 21 -19.7 NP_817375 5' arm      3' arm
18100 + 20119 89 23.5 -19.7 NP_817358 5' arm      3' arm
18191 - 27425 89 20 -19.8 NP_817370 5' arm      3' arm
18212 - 40017 88 20.5 -19.81 NP_817395 5' arm      3' arm
18229 - 50475 89 21.5 -19.9 NP_817425 5' arm      3' arm
18090 + 16858 90 19.5 -19.9 NP_817355 5' arm      3' arm
18215 - 40926 90 22 -20 NP_817397 5' arm      3' arm
18211 - 39396 90 20 -20 NP_817395 5' arm      3' arm
18196 - 30110 90 20.5 -20 NP_817375 5' arm      3' arm
18228 - 49851 89 19 -20 NP_817423 5' arm      3' arm
18061 + 4233 90 21 -20.04 NP_817342 5' arm      3' arm
18142 + 42939 90 19 -20.1 NP_817403 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.