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| GenBank Identifier | RefSeq Acc. | Name |
| 29565766 | NC_004680.1 | Mycobacteriophage Che8 virion |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 18179 | - | 15614 | 85 | 26.5 | -23.8 | NP_817354 | 5' arm 3' arm | ||
| 18232 | - | 52564 | 87 | 26 | -31.4 | NP_817434 | 5' arm 3' arm | ||
| 18245 | - | 58573 | 89 | 26 | -23.9 | NP_817448 | 5' arm 3' arm | ||
| 18246 | - | 59231 | 88 | 26 | -22.2 | NP_817450 | 5' arm 3' arm | ||
| 18091 | + | 16995 | 89 | 25.5 | -20.4 | NP_817355 | 5' arm 3' arm | ||
| 18049 | + | 1018 | 88 | 25 | -27.3 | NP_817340 | 5' arm 3' arm | ||
| 18126 | + | 34672 | 90 | 24.5 | -28 | NP_817385 | 5' arm 3' arm | ||
| 18053 | + | 1917 | 87 | 24.5 | -25.6 | NP_817340 | 5' arm 3' arm | ||
| 18058 | + | 2964 | 90 | 24 | -21.3 | NP_817341 | 5' arm 3' arm | ||
| 18152 | + | 48339 | 85 | 24 | -26.5 | NP_817419 | 5' arm 3' arm | ||
| 18073 | + | 8818 | 89 | 24 | -22.4 | NP_817350 | 5' arm 3' arm | ||
| 18199 | - | 32364 | 90 | 24 | -19.4 | NP_817382 | 5' arm 3' arm | ||
| 18145 | + | 45258 | 89 | 24 | -20.8 | NP_817408 | 5' arm 3' arm | ||
| 18104 | + | 21284 | 90 | 24 | -35.6 | NP_817358 | 5' arm 3' arm | ||
| 18106 | + | 22164 | 87 | 24 | -19.4 | NP_817359 | 5' arm 3' arm | ||
| 18238 | - | 55211 | 90 | 24 | -19.4 | NP_817442 | 5' arm 3' arm | ||
| 18181 | - | 16861 | 89 | 24 | -23.6 | NP_817355 | 5' arm 3' arm | ||
| 18100 | + | 20119 | 89 | 23.5 | -19.7 | NP_817358 | 5' arm 3' arm | ||
| 18239 | - | 56098 | 89 | 23.5 | -26.1 | NP_817445 | 5' arm 3' arm | ||
| 18131 | + | 36761 | 87 | 23.5 | -20.7 | NP_817387 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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