miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
18546	+	5403	87	20	-22.8	NP_817599		5' arm      3' arm
18665	-	5913	89	19.5	-21.4	NP_817599		5' arm      3' arm
18663	-	5591	89	24.5	-22.3	NP_817599		5' arm      3' arm
18660	-	4940	90	20	-22.4	NP_817599		5' arm      3' arm
18666	-	6413	89	20	-21.2	NP_817600		5' arm      3' arm
18667	-	6766	87	21.5	-19.8	NP_817600		5' arm      3' arm
18668	-	6982	89	22.5	-20.9	NP_817600		5' arm      3' arm
18675	-	8696	87	23.5	-32.9	NP_817601		5' arm      3' arm
18552	+	8654	90	21	-24.7	NP_817601		5' arm      3' arm
18548	+	7160	87	21	-25.9	NP_817601		5' arm      3' arm
18671	-	7803	90	22.5	-21.7	NP_817601		5' arm      3' arm
18551	+	8320	90	20	-20.8	NP_817601		5' arm      3' arm
18670	-	7677	90	19.5	-22.5	NP_817601		5' arm      3' arm
18550	+	8167	89	19	-24.4	NP_817601		5' arm      3' arm
18549	+	7990	89	22.5	-23.9	NP_817601		5' arm      3' arm
18674	-	8385	90	19.5	-19.4	NP_817601		5' arm      3' arm
18672	-	7968	90	23.5	-23	NP_817601		5' arm      3' arm
18669	-	7487	90	21	-26.1	NP_817601		5' arm      3' arm
18673	-	8078	90	21.5	-26.9	NP_817601		5' arm      3' arm
18679	-	9641	90	22.5	-20.1	NP_817602		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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