miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
18566	+	16232	89	22	-26.7	NP_817615		5' arm      3' arm
18586	+	26275	89	21.5	-26.7	NP_817623		5' arm      3' arm
18694	-	14290	90	19.5	-26.6	NP_817611		5' arm      3' arm
18563	+	14097	89	19	-26.6	NP_817611		5' arm      3' arm
18686	-	11282	90	19	-26.52	NP_817604		5' arm      3' arm
18699	-	16611	86	21	-26.5	NP_817615		5' arm      3' arm
18700	-	16717	88	19	-26.5	NP_817615		5' arm      3' arm
18652	-	1623	84	20	-26.2	NP_817594		5' arm      3' arm
18669	-	7487	90	21	-26.1	NP_817601		5' arm      3' arm
18613	+	36154	88	19	-26.1	NP_817641		5' arm      3' arm
18644	+	50155	89	22	-26			5' arm      3' arm
18618	+	37905	90	20	-26	NP_817644		5' arm      3' arm
18623	+	40016	87	22	-25.9	NP_817650		5' arm      3' arm
18548	+	7160	87	21	-25.9	NP_817601		5' arm      3' arm
18707	-	22149	89	20	-25.84	NP_817617		5' arm      3' arm
18698	-	16494	90	21	-25.8	NP_817615		5' arm      3' arm
18693	-	13794	87	20.5	-25.7			5' arm      3' arm
18710	-	25277	85	22.5	-25.7			5' arm      3' arm
18620	+	38201	90	20.5	-25.6			5' arm      3' arm
18723	-	32748	82	19	-25.5	NP_817637		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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