miRNA display CGI


Results 1 - 20 of 227 are showing below:
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GenBank Identifier RefSeq Acc. Name
29566108 NC_004683.1 Mycobacteriophage Che9c virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
18808 + 35866 89 19.5 -19.9 5' arm      3' arm
18811 + 36894 87 19.5 -22.3 5' arm      3' arm
18822 + 42131 87 19 -20.6 5' arm      3' arm
18866 - 9378 87 24.5 -19.7 5' arm      3' arm
18910 - 32255 90 21.5 -20.1 5' arm      3' arm
18810 + 36680 87 19.5 -26 5' arm      3' arm
18860 - 6670 90 23 -25.7 5' arm      3' arm
18781 + 17498 90 19.5 -19.5 5' arm      3' arm
18788 + 21402 89 20 -24.71 5' arm      3' arm
18796 + 26605 90 23.5 -34.2 5' arm      3' arm
18809 + 36054 90 22 -21 5' arm      3' arm
18755 + 2219 90 23.5 -24.3 5' arm      3' arm
18918 - 36657 90 22.5 -28.5 5' arm      3' arm
18754 + 1609 82 19.5 -19.74 NP_817679 5' arm      3' arm
18753 + 1307 88 20 -21.5 NP_817679 5' arm      3' arm
18752 + 1076 88 20.5 -19.6 NP_817679 5' arm      3' arm
18844 - 938 90 19 -26.3 NP_817679 5' arm      3' arm
18843 - 844 89 20.5 -24.2 NP_817679 5' arm      3' arm
18751 + 900 88 22.5 -20.5 NP_817679 5' arm      3' arm
18845 - 1614 90 19.5 -21.2 NP_817679 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.