miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
19111	+	63861	85	28	-26.2	NP_817844		5' arm      3' arm
19104	+	59276	88	27.5	-32.8	NP_817831		5' arm      3' arm
19066	+	46395	89	26.5	-30.4	NP_817811		5' arm      3' arm
19082	+	52621	87	25	-19.7	NP_817818		5' arm      3' arm
19218	-	42452	89	25	-22.9	NP_817807		5' arm      3' arm
19114	+	64598	88	25	-33.6	NP_817844		5' arm      3' arm
19119	+	67121	90	24.5	-31.1	NP_817851		5' arm      3' arm
19134	-	7188	90	24.5	-21.2	NP_817770		5' arm      3' arm
19156	-	18578	89	24.5	-24	NP_817782		5' arm      3' arm
19169	-	24006	89	24.5	-23.4	NP_817790		5' arm      3' arm
19054	+	41618	89	24.5	-25	NP_817807		5' arm      3' arm
19086	+	53407	88	24.5	-23.8	NP_817819		5' arm      3' arm
19071	+	47775	90	24	-22.7			5' arm      3' arm
19040	+	35217	86	24	-35	NP_817797		5' arm      3' arm
19051	+	40614	88	24	-29.84	NP_817806		5' arm      3' arm
19143	-	11751	87	24	-30.3	NP_817774		5' arm      3' arm
19219	-	42702	90	24	-27	NP_817808		5' arm      3' arm
19053	+	41420	90	24	-32.2	NP_817807		5' arm      3' arm
19110	+	63746	89	23.5	-31.7	NP_817843		5' arm      3' arm
19248	-	58315	89	23.5	-24.9	NP_817829		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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