miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
19037	+	33329	90	20.5	-21.9	NP_817794		5' arm      3' arm
19038	+	34743	87	21	-20	NP_817796		5' arm      3' arm
19039	+	34835	88	20	-24.5	NP_817797		5' arm      3' arm
19040	+	35217	86	24	-35	NP_817797		5' arm      3' arm
19041	+	37114	90	20.5	-24.1	NP_817799		5' arm      3' arm
19042	+	37706	90	20	-20.8	NP_817800		5' arm      3' arm
19043	+	37812	90	19.5	-24	NP_817800		5' arm      3' arm
19044	+	38642	88	19.5	-19.52			5' arm      3' arm
19045	+	38815	83	20	-31.3	NP_817803		5' arm      3' arm
19046	+	39253	86	19	-26.6	NP_817803		5' arm      3' arm
19047	+	39380	89	19	-23.2	NP_817804		5' arm      3' arm
19048	+	39469	86	20.5	-19.6	NP_817804		5' arm      3' arm
19049	+	39836	89	21.5	-20			5' arm      3' arm
19050	+	39962	89	23	-31.1			5' arm      3' arm
19051	+	40614	88	24	-29.84	NP_817806		5' arm      3' arm
19052	+	41225	90	22.5	-33.9	NP_817807		5' arm      3' arm
19053	+	41420	90	24	-32.2	NP_817807		5' arm      3' arm
19054	+	41618	89	24.5	-25	NP_817807		5' arm      3' arm
19055	+	41882	90	20	-20.7	NP_817807		5' arm      3' arm
19056	+	42516	89	21	-23.4	NP_817808		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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