miRNA display CGI


Results 1 - 20 of 161 are showing below:
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GenBank Identifier RefSeq Acc. Name
29566975 NC_004689.1 Mycobacteriophage Barnyard virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
20833 + 68474 90 20 -27 NP_818646 5' arm      3' arm
20919 - 69841 90 20 -19.5 NP_818646 5' arm      
20918 - 69066 90 26 -28.3 NP_818646 5' arm      3' arm
20917 - 68834 90 20 -20.7 NP_818646 5' arm      3' arm
20916 - 68087 90 19.5 -26 NP_818646 5' arm      3' arm
20832 + 65994 90 21 -22.1 NP_818641 5' arm      3' arm
20915 - 65615 89 20.5 -21.1 NP_818639 5' arm      
20831 + 65525 89 20 -25.4 NP_818639 5' arm      3' arm
20914 - 65347 73 22.5 -20.4 NP_818638 5' arm      3' arm
20913 - 64482 88 20.5 -24.1 NP_818636 5' arm      3' arm
20830 + 64326 89 21 -22.1 NP_818636 5' arm      3' arm
20912 - 64278 86 20 -19.9 NP_818635 5' arm      3' arm
20829 + 63846 90 20 -22.1 NP_818634 5' arm      3' arm
20828 + 62907 88 22 -21.6 NP_818632 5' arm      3' arm
20827 + 61948 90 24.5 -22.6 NP_818628 5' arm      3' arm
20826 + 61078 89 21 -21.5 NP_818626 5' arm      3' arm
20911 - 60783 89 22 -23 NP_818625       3' arm
20825 + 60573 90 24 -35.7 NP_818625 5' arm      3' arm
20910 - 60660 85 21 -25 NP_818625 5' arm      3' arm
20824 + 60001 84 19 -22.1 NP_818623 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.