miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17474	+	15179	87	21.5	-32.9			5' arm      3' arm
17515	-	38512	90	20	-28.3			5' arm      3' arm
17504	-	18474	89	20.5	-27.3	NP_758916		5' arm      3' arm
17507	-	20958	79	19.5	-27	NP_758917		5' arm      3' arm
17483	+	25325	87	24	-26.9	NP_758925		5' arm      3' arm
17503	-	17870	89	22.5	-26.4	NP_758915		5' arm      3' arm
17479	+	20158	85	19.5	-25.6	NP_758917		5' arm      3' arm
17471	+	7730	79	21.5	-25.5	NP_758900		5' arm      3' arm
17502	-	15903	89	23	-25.2	NP_758914		5' arm      3' arm
17488	+	34178	89	21.5	-25.2	NP_758934		5' arm      3' arm
17514	-	35788	89	21.5	-25.2	NP_758934		5' arm      3' arm
17501	-	13348	84	21.5	-25.2	NP_758910		5' arm      3' arm
17509	-	28023	89	24.5	-25	NP_758928		5' arm      3' arm
17517	-	41327	87	19	-24.66			5' arm      3' arm
17476	+	17307	90	20.5	-24.5	NP_758915		5' arm      3' arm
17473	+	12417	89	21	-23.8			5' arm      3' arm
17512	-	32297	89	22.5	-23.6			5' arm      3' arm
17511	-	30263	89	20	-23.6	NP_758930		5' arm      3' arm
17482	+	24494	88	19.5	-23.5			5' arm      3' arm
17493	+	36720	89	23	-23.4	NP_758937		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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