miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17510	-	29036	89	19	-21.9			5' arm      3' arm
17469	+	6592	90	19	-20	NP_758899		5' arm      3' arm
17517	-	41327	87	19	-24.66			5' arm      3' arm
17506	-	20681	90	19	-20	NP_758917		5' arm      3' arm
17480	+	20422	90	19.5	-20.7	NP_758917		5' arm      3' arm
17498	-	2700	90	19.5	-21.4	NP_758895		5' arm      3' arm
17507	-	20958	79	19.5	-27	NP_758917		5' arm      3' arm
17482	+	24494	88	19.5	-23.5			5' arm      3' arm
17516	-	40363	90	19.5	-21.1	NP_758942		5' arm      3' arm
17513	-	35590	90	19.5	-22	NP_758934		5' arm      3' arm
17492	+	36110	86	19.5	-22.1	NP_758935		5' arm      3' arm
17479	+	20158	85	19.5	-25.6	NP_758917		5' arm      3' arm
17496	+	38437	88	20	-21.4			5' arm      3' arm
17481	+	20739	86	20	-20.8	NP_758917		5' arm      3' arm
17477	+	19288	89	20	-20.5	NP_758916		5' arm      3' arm
17499	-	4260	88	20	-23.07	NP_758897		5' arm      3' arm
17515	-	38512	90	20	-28.3			5' arm      3' arm
17500	-	6862	87	20	-22.9	NP_758899		5' arm      3' arm
17491	+	35623	83	20	-22.3	NP_758934		5' arm      3' arm
17511	-	30263	89	20	-23.6	NP_758930		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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