miRNA display CGI


Results 1 - 20 of 32 are showing below:
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GenBank Identifier RefSeq Acc. Name
20069879 NC_003529.1 Mamestra configurata NPV-A

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
14726 - 150383 90 20 -21 NP_613249 5' arm      3' arm
14725 - 126502 90 19.5 -27.2 NP_613222 5' arm      3' arm
14724 - 94215 85 20 -26.09 NP_613184 5' arm      3' arm
14723 - 94007 85 19.5 -23.3 NP_613184 5' arm      3' arm
14722 - 75355 90 21 -24 NP_613168 5' arm      3' arm
14721 - 68021 89 19.5 -20 NP_613160 5' arm      3' arm
14720 - 59198 89 19 -20.1 NP_613151 5' arm      3' arm
14719 - 58274 89 22 -22.6 NP_613149 5' arm      3' arm
14718 - 55109 89 23 -23.9 NP_613143 5' arm      3' arm
14717 - 21877 90 25 -23.3 NP_613106 5' arm      3' arm
14716 - 21726 88 22 -21.4 NP_613105 5' arm      3' arm
14715 - 21217 88 19 -24.7 NP_613105 5' arm      3' arm
14714 - 20803 82 20 -19.7 NP_613105 5' arm      3' arm
14713 + 145785 90 25.5 -26 NP_613243 5' arm      3' arm
14712 + 145111 89 20.5 -21.7 NP_613243 5' arm      3' arm
14711 + 144512 90 22 -19.5 NP_613243 5' arm      3' arm
14710 + 126416 84 21 -21.6 NP_613222 5' arm      3' arm
14709 + 95422 86 26.5 -22.5 NP_613186 5' arm      3' arm
14708 + 93879 85 22 -19.6 NP_613184 5' arm      3' arm
14707 + 86858 78 21 -24.9 NP_613177 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.