miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17030	+	13545	84	20.5	-23.1	NP_705643		5' arm      3' arm
17031	+	13725	90	21	-27.7	NP_705643		5' arm      3' arm
17032	+	14646	90	22.5	-21.7	NP_705644		5' arm      3' arm
17033	+	15617	89	25.5	-30.5	NP_705645		5' arm      3' arm
17034	+	15978	87	23	-19.7	NP_705645		5' arm      3' arm
17035	+	16643	89	20.5	-20.9	NP_705646		5' arm      3' arm
17036	+	16828	90	19.5	-21.7			5' arm      3' arm
17037	+	17220	90	22.5	-21.6	NP_705646		5' arm      3' arm
17038	+	18337	87	20	-22.8	NP_705647		5' arm      3' arm
17039	+	19765	88	22	-26.2	NP_705650		5' arm      3' arm
17040	+	20183	88	19	-20.01	NP_705652		5' arm      3' arm
17041	+	20716	90	21.5	-33.2	NP_705653		5' arm      3' arm
17042	+	21034	90	20.5	-23.7	NP_705653		5' arm      3' arm
17043	+	21168	90	21	-28.3	NP_705653		5' arm      3' arm
17044	+	21665	88	19.5	-20.3	NP_705654		5' arm      3' arm
17045	+	22000	90	19	-20.9			5' arm      3' arm
17046	+	22158	88	20	-24.4	NP_705655		5' arm      3' arm
17047	+	22576	88	23	-19.8	NP_705657		5' arm      3' arm
17048	+	22814	90	24	-21.2	NP_705657		5' arm      3' arm
17049	+	23026	88	19.5	-23.2	NP_705657		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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