miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23265	+	37539	90	23.5	-23.7	NP_943820		5' arm      3' arm
23266	+	37779	87	21.5	-25.3	NP_943820		5' arm      3' arm
23267	+	38543	89	20.5	-21.9	NP_943821		5' arm      3' arm
23268	+	39030	89	23	-25.1	NP_943823		5' arm      3' arm
23269	+	39213	90	20.5	-23.1	NP_943824		5' arm      3' arm
23270	+	39365	90	21	-20.8	NP_943824		5' arm      3' arm
23271	+	39475	89	19	-21.1	NP_943824		5' arm      3' arm
23272	+	39903	89	22	-19.6	NP_943826		5' arm      3' arm
23273	+	40105	90	22.5	-24	NP_943826		5' arm      3' arm
23274	+	40243	90	25	-25.2	NP_943826		5' arm      3' arm
23275	+	40621	87	19	-21.3	NP_943827		5' arm      3' arm
23276	+	41098	83	20	-22	NP_943827		5' arm      3' arm
23277	+	41634	88	19.5	-24.1	NP_943827		5' arm      3' arm
23278	+	42220	88	20.5	-25.7	NP_943828		5' arm      3' arm
23279	+	42384	90	24.5	-29.7	NP_943828		5' arm      3' arm
23280	+	43232	80	22	-37			5' arm      3' arm
23281	+	43583	88	22	-30.2	NP_943829		5' arm      3' arm
23282	+	43696	90	21.5	-20.9	NP_943829		5' arm      3' arm
23283	+	44063	90	24	-23.5	NP_943830		5' arm      3' arm
23284	+	44190	90	19	-23.5	NP_943830		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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