miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22049	+	24458	83	20	-25.2	NP_861625		5' arm      3' arm
22050	+	25624	90	20	-24.5	NP_861626		5' arm      3' arm
22064	+	35286	88	20	-19.7	NP_861644		5' arm      3' arm
22063	+	35106	90	20	-25.7	NP_861644		5' arm      3' arm
22121	-	21977	83	20	-21.7			5' arm      3' arm
22053	+	28713	85	20	-25.4	NP_861634		5' arm      3' arm
22056	+	31140	89	20	-30.6			5' arm      3' arm
22057	+	31573	77	20	-27.3	NP_861640		5' arm      3' arm
22150	-	46335	82	20	-24.51	NP_861655		5' arm      3' arm
22146	-	40858	87	20	-26.6			5' arm      3' arm
22058	+	32264	87	20	-23.2	NP_861642		5' arm      3' arm
22106	-	5058	90	20	-28.1			5' arm      3' arm
22101	-	2431	90	20	-21.4	NP_861589		3' arm
22141	-	36367	90	20.5	-24.6	NP_861646		5' arm      3' arm
22075	+	44849	89	20.5	-21.1	NP_861654		5' arm      3' arm
22074	+	42640	90	20.5	-24	NP_861654		5' arm      3' arm
22161	-	57109	88	20.5	-24.8	NP_861667		5' arm      3' arm
22135	-	32280	89	20.5	-26.7	NP_861642		5' arm      3' arm
22187	-	70606	88	20.5	-22.7	NP_861682		5' arm      3' arm
22175	-	63933	88	20.5	-26.9	NP_861675		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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