miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22173	-	61706	90	21.5	-24.7	NP_861672		5' arm      3' arm
22069	+	38038	86	21.5	-25.7	NP_861650		5' arm      3' arm
22071	+	39809	82	21.5	-23.3	NP_861652		5' arm      3' arm
22073	+	40505	88	21.5	-21.4	NP_861652		5' arm      3' arm
22153	-	50785	88	21.5	-23.1	NP_861659		3' arm
22028	+	7636	89	21	-21.7			5' arm      3' arm
22038	+	16343	89	21	-22.2	NP_861615		5' arm      3' arm
22185	-	69098	87	21	-27.6	NP_861680		5' arm      3' arm
22176	-	64144	90	21	-33	NP_861675		5' arm      3' arm
22143	-	38675	90	21	-21	NP_861650		5' arm      3' arm
22046	+	22442	90	21	-26.2	NP_861624		5' arm      3' arm
22158	-	54222	86	21	-26.4	NP_861662		5' arm      3' arm
22118	-	20317	89	21	-25.9	NP_861620		5' arm      3' arm
22112	-	13466	88	21	-23	NP_861609		3' arm
22166	-	58602	90	21	-19.8	NP_861668		5' arm      3' arm
22051	+	28312	90	21	-29.2	NP_861634		5' arm      3' arm
22062	+	34949	89	21	-21.7	NP_861644		5' arm      3' arm
22162	-	57390	90	21	-29.5	NP_861667		5' arm      3' arm
22134	-	31237	90	21	-22.3			5' arm      3' arm
22188	-	71858	90	21	-19.6	NP_861683		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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