miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22074	+	42640	90	20.5	-24	NP_861654		5' arm      3' arm
22133	-	31063	79	19.5	-23.8	NP_861639		5' arm      3' arm
22090	+	67077	88	22	-23.8	NP_861677		5' arm      3' arm
22171	-	61345	90	19	-23.7	NP_861672		3' arm
22184	-	68829	86	20	-23.7	NP_861680		5' arm      3' arm
22031	+	11368	87	20	-23.6	NP_861607		5' arm      3' arm
22086	+	61664	87	23	-23.6	NP_861672		5' arm      3' arm
22091	+	67841	90	22	-23.6	NP_861678		5' arm      3' arm
22096	+	72444	90	19.5	-23.5	NP_861683		5' arm      3' arm
22168	-	58973	85	19.5	-23.3	NP_861668		5' arm
22071	+	39809	82	21.5	-23.3	NP_861652		5' arm      3' arm
22105	-	4533	89	22	-23.3	NP_861594		5' arm      3' arm
22058	+	32264	87	20	-23.2	NP_861642		5' arm      3' arm
22145	-	39927	80	19.5	-23.2	NP_861652		5' arm      3' arm
22192	-	74256	90	19.5	-23.2	NP_861689		5' arm      3' arm
22142	-	37356	88	23	-23.2			5' arm      3' arm
22115	-	14748	89	20	-23.1	NP_861612		5' arm
22153	-	50785	88	21.5	-23.1	NP_861659		3' arm
22167	-	58702	89	22	-23.1	NP_861668		5' arm      3' arm
22112	-	13466	88	21	-23	NP_861609		3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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