miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23532	-	57942	90	21	-21.6	NP_943956		5' arm      3' arm
23533	-	60364	87	20.5	-20.9	NP_943964		5' arm      3' arm
23530	-	49732	90	20.5	-19.7			5' arm      3' arm
23531	-	52475	90	19	-23.3			5' arm      3' arm
23542	-	168276	80	20.5	-28.1			5' arm      3' arm
23543	-	180475	89	21	-22.1	NP_944148		5' arm      3' arm
23546	-	186394	88	20	-21			5' arm      3' arm
23556	-	230926	89	27	-26.4			5' arm      3' arm
23554	-	228400	89	27	-31.8	NP_944223		5' arm      3' arm
23555	-	229800	90	19	-19.7	NP_944225		5' arm      3' arm
23553	-	222478	89	22.5	-23.9	NP_944215		5' arm      3' arm
23552	-	213239	90	23.5	-26.5	NP_944212		5' arm      3' arm
23551	-	210360	87	20.5	-21.2	NP_944211		5' arm      3' arm
23550	-	204220	90	23	-19.96	NP_944201		5' arm      3' arm
23549	-	201685	87	19	-20.2	NP_944197		5' arm      3' arm
23548	-	201126	89	19	-24.6	NP_944196		5' arm      3' arm
23547	-	187732	88	21	-28.7	NP_944165		5' arm      3' arm
23545	-	185497	90	21	-24.5			5' arm      3' arm
23544	-	184113	86	21	-20	NP_944157		5' arm      3' arm
23529	-	16547	90	19.5	-20.6	NP_943897		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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