miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21890	-	27805	83	20	-24.4	NP_858980		5' arm      3' arm
21875	-	1740	86	21.5	-24.3	NP_858953		5' arm      3' arm
21889	-	27226	89	19	-24.2	NP_858979		5' arm      3' arm
21880	-	11106	89	21.5	-24			5' arm      3' arm
21847	+	6178	90	23	-23.7	NP_858956		5' arm      3' arm
21866	+	24319	90	19.5	-23.6	NP_858978		5' arm      3' arm
21900	-	42010	88	20	-23.4	NP_859004		5' arm      3' arm
21884	-	21304	88	22	-23.3	NP_858973		5' arm      3' arm
21882	-	21100	88	22	-23.3	NP_858973		5' arm      3' arm
21883	-	21202	88	22	-23.3	NP_858973		5' arm      3' arm
21895	-	35050	82	21.5	-23.2			5' arm      3' arm
21873	-	622	86	20	-23	NP_858949		5' arm      3' arm
21901	-	42787	89	23.5	-22.8			5' arm      3' arm
21868	+	25532	89	21	-22.8	NP_858979		5' arm      3' arm
21867	+	25386	88	21.5	-22.62	NP_858979		5' arm      3' arm
21841	+	830	90	20.5	-22.6	NP_858950		5' arm      3' arm
21898	-	36622	89	20	-22.5	NP_858991		5' arm      3' arm
21846	+	6082	90	21.5	-22.4	NP_858956		5' arm      3' arm
21843	+	1672	89	20	-22.2	NP_858953		5' arm      3' arm
21878	-	10566	89	21	-22.1	NP_858965		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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