miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21876	-	3131	87	21	-19.9	NP_858953		5' arm      3' arm
21882	-	21100	88	22	-23.3	NP_858973		5' arm      3' arm
21888	-	27018	90	22	-19.5	NP_858979		5' arm      3' arm
21879	-	10770	87	20.5	-25.3	NP_858965		5' arm      3' arm
21873	-	622	86	20	-23	NP_858949		5' arm      3' arm
21875	-	1740	86	21.5	-24.3	NP_858953		5' arm      3' arm
21893	-	33505	90	19.5	-20.2	NP_858986		5' arm      3' arm
21894	-	34680	88	19.5	-26.6	NP_858988		5' arm      3' arm
21881	-	18317	89	19.5	-20.8	NP_858969		5' arm      3' arm
21845	+	5542	90	24	-25.8	NP_858956		5' arm      3' arm
21869	+	28763	90	20	-19.5	NP_858982		5' arm      3' arm
21851	+	6892	90	19.5	-19.5	NP_858957		5' arm      3' arm
21849	+	6464	86	20.5	-21.1	NP_858956		5' arm      3' arm
21850	+	6742	90	21.5	-21.8	NP_858957		5' arm      3' arm
21863	+	18567	89	23	-24.7	NP_858969		5' arm      3' arm
21864	+	19237	87	22	-28.7			5' arm      3' arm
21867	+	25386	88	21.5	-22.62	NP_858979		5' arm      3' arm
21868	+	25532	89	21	-22.8	NP_858979		5' arm      3' arm
21866	+	24319	90	19.5	-23.6	NP_858978		5' arm      3' arm
21865	+	23521	88	19	-25.3			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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