miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
17436	+	374	90	24	-22.7	YP_068055		5' arm      3' arm
17437	+	2443	90	22	-20	YP_068057		5' arm      3' arm
17438	+	3638	90	22	-21.8	YP_068059		5' arm      3' arm
17439	+	6654	90	19.5	-19.56	YP_068060		5' arm      3' arm
17440	+	7292	87	22	-23.2	YP_068060		5' arm      3' arm
17441	+	10008	90	21	-21.9	YP_068062		5' arm      3' arm
17442	+	10099	89	19.5	-20.6	YP_068062		5' arm      3' arm
17443	+	17130	90	20	-21.8	YP_068069		5' arm      3' arm
17444	+	18836	90	19.5	-24.2	YP_068070		5' arm      3' arm
17445	+	18967	90	20.5	-19.8	YP_068070		5' arm      3' arm
17446	+	19456	86	21.5	-26.9	YP_068071		5' arm      3' arm
17447	+	20247	85	22.5	-25.6	YP_068071		5' arm      3' arm
17448	+	21807	89	19	-21.8	YP_068072		5' arm      3' arm
17449	+	25572	87	21	-22.3	YP_068077		5' arm      3' arm
17450	+	33106	87	21	-22.7	YP_068090		5' arm      3' arm
17451	-	8282	90	24	-30.3	YP_068061		5' arm      3' arm
17452	-	14164	89	19	-25	YP_068066		5' arm      3' arm
17453	-	14440	89	19	-23.5	YP_068066		5' arm      3' arm
17454	-	14627	84	21	-20.2	YP_068066		5' arm      3' arm
17455	-	16461	90	22.5	-24.5	YP_068069		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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