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GenBank Identifier | RefSeq Acc. | Name |
34610128 | NC_005091.1 | Burkholderia cepacia phage BcepNazgul |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
22690 | - | 26102 | 89 | 26 | -32.2 | 5' arm 3' arm | |||
22625 | + | 39845 | 88 | 26 | -30.6 | 5' arm 3' arm | |||
22636 | + | 49882 | 87 | 25.5 | -24.6 | 5' arm 3' arm | |||
22664 | - | 7880 | 89 | 25.5 | -24.1 | 5' arm 3' arm | |||
22729 | - | 53058 | 89 | 25 | -31.2 | 5' arm 3' arm | |||
22660 | - | 6654 | 87 | 24.5 | -22.4 | 5' arm 3' arm | |||
22596 | + | 28077 | 80 | 24.5 | -22 | 5' arm 3' arm | |||
22615 | + | 34360 | 90 | 24 | -26.5 | 5' arm 3' arm | |||
22646 | + | 52118 | 89 | 24 | -33.7 | 5' arm 3' arm | |||
22590 | + | 26111 | 90 | 24 | -25.3 | 5' arm 3' arm | |||
22734 | - | 56145 | 89 | 24 | -25.4 | 5' arm 3' arm | |||
22726 | - | 48833 | 89 | 23.5 | -23.1 | 5' arm 3' arm | |||
22735 | - | 56334 | 90 | 23.5 | -22.3 | 5' arm 3' arm | |||
22600 | + | 29431 | 87 | 23.5 | -19.8 | 5' arm 3' arm | |||
22585 | + | 23105 | 90 | 23.5 | -25.4 | 5' arm 3' arm | |||
22725 | - | 48580 | 75 | 23 | -20.1 | 5' arm 3' arm | |||
22621 | + | 36992 | 90 | 23 | -23.9 | 5' arm 3' arm | |||
22572 | + | 17164 | 88 | 23 | -19.4 | 5' arm 3' arm | |||
22573 | + | 17486 | 90 | 23 | -23.3 | 5' arm 3' arm | |||
22589 | + | 26014 | 89 | 23 | -22.4 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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