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GenBank Identifier | RefSeq Acc. | Name |
34610128 | NC_005091.1 | Burkholderia cepacia phage BcepNazgul |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
22571 | + | 16735 | 90 | 22 | -23.2 | 5' arm 3' arm | |||
22572 | + | 17164 | 88 | 23 | -19.4 | 5' arm 3' arm | |||
22573 | + | 17486 | 90 | 23 | -23.3 | 5' arm 3' arm | |||
22574 | + | 17953 | 87 | 20 | -22.5 | 5' arm 3' arm | |||
22575 | + | 18736 | 90 | 22.5 | -28.6 | 5' arm 3' arm | |||
22576 | + | 19240 | 87 | 19.5 | -27.6 | 5' arm 3' arm | |||
22577 | + | 20204 | 88 | 21.5 | -23.4 | 5' arm 3' arm | |||
22578 | + | 21023 | 90 | 20.5 | -19.8 | 5' arm 3' arm | |||
22579 | + | 21231 | 90 | 21 | -30.7 | 5' arm 3' arm | |||
22580 | + | 21525 | 89 | 21 | -23.7 | 5' arm 3' arm | |||
22581 | + | 21812 | 87 | 21.5 | -21.32 | 5' arm 3' arm | |||
22582 | + | 22351 | 90 | 20.5 | -26.8 | 5' arm 3' arm | |||
22583 | + | 22476 | 89 | 21.5 | -22.5 | 5' arm 3' arm | |||
22584 | + | 23007 | 90 | 20 | -20.7 | 5' arm 3' arm | |||
22585 | + | 23105 | 90 | 23.5 | -25.4 | 5' arm 3' arm | |||
22586 | + | 24660 | 90 | 22 | -25.4 | 5' arm 3' arm | |||
22587 | + | 25034 | 88 | 20 | -20 | 5' arm 3' arm | |||
22588 | + | 25273 | 89 | 20 | -23 | 5' arm 3' arm | |||
22589 | + | 26014 | 89 | 23 | -22.4 | 5' arm 3' arm | |||
22590 | + | 26111 | 90 | 24 | -25.3 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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