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GenBank Identifier | RefSeq Acc. | Name |
34610128 | NC_005091.1 | Burkholderia cepacia phage BcepNazgul |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
22568 | + | 14051 | 90 | 22.5 | -19.6 | 5' arm 3' arm | |||
22552 | + | 727 | 87 | 23 | -20.5 | 5' arm 3' arm | |||
22557 | + | 3322 | 90 | 20.5 | -20.7 | 5' arm 3' arm | |||
22553 | + | 1273 | 90 | 20 | -26.1 | 5' arm 3' arm | |||
22558 | + | 4813 | 89 | 20 | -27 | 5' arm 3' arm | |||
22554 | + | 1822 | 90 | 19.5 | -19.8 | 5' arm 3' arm | |||
22555 | + | 2094 | 90 | 19 | -19.9 | 5' arm 3' arm | |||
22556 | + | 2589 | 89 | 19 | -26 | 5' arm 3' arm | |||
22559 | + | 5081 | 90 | 22.5 | -20 | 5' arm 3' arm | |||
22560 | + | 5414 | 87 | 19.5 | -22.5 | 5' arm 3' arm | |||
22563 | + | 8245 | 90 | 19.5 | -21.1 | 5' arm 3' arm | |||
22561 | + | 6615 | 90 | 19 | -22.1 | 5' arm 3' arm | |||
22562 | + | 8055 | 89 | 19 | -24 | 5' arm 3' arm | |||
22564 | + | 10805 | 87 | 21.5 | -24.9 | 5' arm 3' arm | |||
22566 | + | 13470 | 90 | 20.5 | -23.5 | 5' arm 3' arm | |||
22567 | + | 13870 | 90 | 20.5 | -34.8 | 5' arm 3' arm | |||
22565 | + | 12955 | 88 | 20 | -27.4 | 5' arm 3' arm | |||
22572 | + | 17164 | 88 | 23 | -19.4 | 5' arm 3' arm | |||
22573 | + | 17486 | 90 | 23 | -23.3 | 5' arm 3' arm | |||
22570 | + | 16420 | 90 | 22.5 | -26.1 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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