miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
26183	-	23962	87	19	-23.5	NP_958138		5' arm      3' arm
26232	-	45733	88	19	-27.5	NP_958166		5' arm      3' arm
26150	-	10153	90	19	-20.4	NP_958119		5' arm      3' arm
26181	-	23319	87	19	-20.8	NP_958137		5' arm      3' arm
26190	-	26948	88	19	-20.6	NP_958142		5' arm      3' arm
26024	+	2011	88	19	-22.4	NP_958108		5' arm      3' arm
26122	+	47476	90	19	-20.6	NP_958169		5' arm      3' arm
26065	+	20179	88	19	-20.01	NP_958131		5' arm      3' arm
26188	-	26339	89	19	-21.4	NP_958141		5' arm      3' arm
26084	+	29793	86	19	-26.2	NP_958149		5' arm      3' arm
26229	-	44924	90	19.5	-20.9	NP_958166		5' arm      3' arm
26187	-	25667	87	19.5	-30.8	NP_958139		5' arm      3' arm
26192	-	28206	87	19.5	-25.2	NP_958144		5' arm      3' arm
26115	+	41999	88	19.5	-22.3	NP_958163		5' arm      3' arm
26061	+	16798	90	19.5	-21.7			5' arm      3' arm
26202	-	32850	85	19.5	-22.9	NP_958152		5' arm      3' arm
26116	+	43983	90	19.5	-23.2	NP_958166		5' arm      3' arm
26032	+	5391	89	19.5	-23.5	NP_958113		5' arm      3' arm
26035	+	6271	87	19.5	-23.8	NP_958114		5' arm      3' arm
26069	+	21661	88	19.5	-20.3	NP_958133		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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