miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
26122	+	47476	90	19	-20.6	NP_958169		5' arm      3' arm
26209	-	38224	82	19	-19.9	NP_958158		5' arm      3' arm
26057	+	14505	88	19	-26.9	NP_958123		5' arm      3' arm
26125	-	705	90	19	-20.3	NP_958105		5' arm      3' arm
26065	+	20179	88	19	-20.01	NP_958131		5' arm      3' arm
26056	+	13624	81	19	-28.9	NP_958122		5' arm      3' arm
26226	-	44173	88	19	-22.7	NP_958166		5' arm      3' arm
26191	-	27256	89	19	-29.2	NP_958143		5' arm      3' arm
26089	+	31655	89	19	-20.1	NP_958150		5' arm      3' arm
26024	+	2011	88	19	-22.4	NP_958108		5' arm      3' arm
26119	+	45120	88	19	-28.4	NP_958166		5' arm      3' arm
26109	+	40038	88	19	-24.04	YP_022749		5' arm      3' arm
26031	+	5032	90	19	-27.5	NP_958112		5' arm      3' arm
26037	+	7547	86	19	-28.8	NP_958117		5' arm      3' arm
26084	+	29793	86	19	-26.2	NP_958149		5' arm      3' arm
26232	-	45733	88	19	-27.5	NP_958166		5' arm      3' arm
26233	-	45943	88	19	-25.7	NP_958167		5' arm      3' arm
26070	+	21996	90	19	-20.9			5' arm      3' arm
26236	-	47473	90	19	-22	NP_958169		5' arm      3' arm
26048	+	10487	89	19	-21	NP_958120		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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