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GenBank Identifier | RefSeq Acc. | Name |
45429984 | NC_005809.1 | Bordetella phage BIP-1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
26814 | + | 637 | 83 | 19.5 | -29.5 | NP_996612 | 5' arm 3' arm | ||
26815 | + | 823 | 88 | 19 | -22.7 | NP_996613 | 5' arm 3' arm | ||
26816 | + | 1074 | 89 | 20.5 | -24.8 | NP_996613 | 5' arm 3' arm | ||
26817 | + | 1177 | 90 | 22.5 | -22 | NP_996613 | 5' arm 3' arm | ||
26818 | + | 1656 | 90 | 22 | -22.9 | NP_996615 | 5' arm 3' arm | ||
26819 | + | 2165 | 90 | 19.5 | -28.2 | NP_996616 | 5' arm 3' arm | ||
26820 | + | 2545 | 90 | 24 | -22.6 | NP_996616 | 5' arm 3' arm | ||
26821 | + | 2657 | 89 | 23 | -24.3 | NP_996616 | 5' arm 3' arm | ||
26822 | + | 3552 | 81 | 19 | -23.3 | NP_996618 | 5' arm 3' arm | ||
26823 | + | 4033 | 83 | 23.5 | -20 | NP_996618 | 5' arm 3' arm | ||
26824 | + | 4118 | 90 | 21.5 | -22 | NP_996618 | 5' arm 3' arm | ||
26825 | + | 4336 | 89 | 20 | -24.5 | NP_996618 | 5' arm 3' arm | ||
26826 | + | 4583 | 89 | 20 | -23.8 | NP_996619 | 5' arm 3' arm | ||
26827 | + | 4829 | 90 | 24.5 | -22.1 | NP_996619 | 5' arm 3' arm | ||
26828 | + | 5075 | 89 | 24 | -21.8 | NP_996619 | 5' arm 3' arm | ||
26829 | + | 5229 | 90 | 25.5 | -25.3 | NP_996619 | 5' arm 3' arm | ||
26830 | + | 5330 | 89 | 20 | -25.5 | NP_996619 | 5' arm 3' arm | ||
26831 | + | 5566 | 88 | 21.5 | -22.1 | NP_996619 | 5' arm 3' arm | ||
26832 | + | 5692 | 90 | 21.5 | -20.3 | NP_996619 | 5' arm 3' arm | ||
26833 | + | 6247 | 85 | 20 | -23.1 | NP_996620 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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