miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
26979	-	36393	88	24.5	-22.7			5' arm      3' arm
26978	-	36174	90	19.5	-20	NP_996650		5' arm      3' arm
26977	-	36079	90	20	-20.5	NP_996650		5' arm      3' arm
26976	-	35956	87	22	-22	NP_996650		5' arm      3' arm
26975	-	35852	88	19.5	-20.1	NP_996650		5' arm      3' arm
26974	-	35680	90	25.5	-22.4	NP_996649		5' arm      3' arm
26973	-	35318	89	23	-20.2	NP_996648		5' arm      3' arm
26972	-	35105	88	24.5	-21.3	NP_996648		5' arm      3' arm
26971	-	34400	87	22.5	-25.5	NP_996648		5' arm      3' arm
26970	-	34262	87	20	-24.9	NP_996647		5' arm      3' arm
26969	-	34170	89	19	-25.9	NP_996647		5' arm      3' arm
26968	-	33977	89	22	-29.2	NP_996647		5' arm      3' arm
26967	-	33823	87	21	-19.5	NP_996646		5' arm      3' arm
26966	-	32653	86	19.5	-26.1	NP_996645		5' arm      3' arm
26965	-	32508	89	26.5	-25	NP_996645		5' arm      3' arm
26964	-	32396	89	24	-24	NP_996645		5' arm      3' arm
26963	-	32295	88	19.5	-19.6	NP_996644		5' arm      3' arm
26962	-	32153	89	23	-27.4			5' arm      3' arm
26961	-	31854	85	22	-24.3			5' arm      3' arm
26960	-	31749	90	22	-21.9	NP_996643		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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