miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27595	+	19560	90	19	-36.5	YP_024705		5' arm      3' arm
27596	+	19757	89	21.5	-22.9	YP_024705		5' arm      3' arm
27597	+	20475	88	19	-19.4	YP_024707		5' arm      3' arm
27598	+	21430	86	20.5	-33.8	YP_024709		5' arm      3' arm
27599	+	21545	90	19.5	-21.1	YP_024709		5' arm      3' arm
27600	+	21778	89	20	-25.6	YP_024710		5' arm      3' arm
27601	+	21975	89	22	-23.6	YP_024710		5' arm      3' arm
27602	+	23322	88	21.5	-23.3	YP_024712		5' arm      3' arm
27603	+	24491	90	21.5	-30.2			5' arm      3' arm
27604	+	25035	90	19.5	-24.9	YP_024716		5' arm      3' arm
27605	+	26819	89	19.5	-21	YP_024717		5' arm      3' arm
27606	+	26919	90	22.5	-25.7	YP_024717		5' arm      3' arm
27607	+	27010	87	19.5	-27	YP_024717		5' arm      3' arm
27608	+	27198	89	20.5	-28.9	YP_024717		5' arm      3' arm
27609	+	27693	83	21	-22.4	YP_024717		5' arm      3' arm
27610	+	28332	87	19	-21.4	YP_024718		5' arm      3' arm
27611	+	28904	89	22.5	-21.2	YP_024719		5' arm      3' arm
27612	+	30294	90	19	-22.2	YP_024721		5' arm      3' arm
27613	+	30456	90	22.5	-29.7	YP_024721		5' arm      3' arm
27614	+	30649	85	19.5	-21.3	YP_024721		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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