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| GenBank Identifier | RefSeq Acc. | Name |
| 48696910 | NC_005882.1 | Burkholderia cenocepacia phage BcepMu |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 27573 | + | 8798 | 90 | 20 | -20.8 | YP_024688 | 5' arm 3' arm | ||
| 27575 | + | 9371 | 90 | 19.5 | -23.8 | YP_024690 | 5' arm 3' arm | ||
| 27646 | - | 10206 | 87 | 20.5 | -22.1 | YP_024691 | 5' arm 3' arm | ||
| 27577 | + | 10356 | 89 | 20.5 | -20.7 | YP_024691 | 5' arm 3' arm | ||
| 27576 | + | 9882 | 87 | 21 | -21.1 | YP_024691 | 5' arm 3' arm | ||
| 27578 | + | 10739 | 90 | 23.5 | -28.2 | YP_024692 | 5' arm 3' arm | ||
| 27579 | + | 10838 | 89 | 24 | -24 | YP_024692 | 5' arm 3' arm | ||
| 27648 | - | 10989 | 88 | 20.5 | -22.7 | YP_024692 | 5' arm 3' arm | ||
| 27580 | + | 10945 | 87 | 19 | -23.1 | YP_024692 | 5' arm 3' arm | ||
| 27581 | + | 11786 | 89 | 21.5 | -21.4 | YP_024694 | 5' arm 3' arm | ||
| 27649 | - | 12207 | 89 | 19 | -28.1 | YP_024695 | 5' arm 3' arm | ||
| 27650 | - | 13052 | 90 | 21.5 | -23 | YP_024697 | 5' arm 3' arm | ||
| 27582 | + | 13494 | 90 | 19.5 | -19.6 | YP_024699 | 5' arm 3' arm | ||
| 27651 | - | 13561 | 89 | 19.5 | -22.26 | YP_024699 | 5' arm 3' arm | ||
| 27652 | - | 14128 | 88 | 23 | -20 | YP_024700 | 5' arm 3' arm | ||
| 27584 | + | 14772 | 89 | 22.5 | -23.2 | YP_024701 | 5' arm 3' arm | ||
| 27653 | - | 14403 | 86 | 19.5 | -20.6 | YP_024701 | 5' arm 3' arm | ||
| 27585 | + | 15464 | 86 | 21 | -21.9 | YP_024701 | 5' arm 3' arm | ||
| 27654 | - | 14759 | 90 | 20 | -23.7 | YP_024701 | 5' arm 3' arm | ||
| 27657 | - | 15478 | 90 | 20.5 | -28.9 | YP_024701 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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