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| GenBank Identifier | RefSeq Acc. | Name |
| 48696910 | NC_005882.1 | Burkholderia cenocepacia phage BcepMu |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 27636 | - | 4174 | 90 | 20 | -20.1 | YP_024681 | 5' arm 3' arm | ||
| 27562 | + | 4510 | 88 | 19 | -24 | YP_024681 | 5' arm 3' arm | ||
| 27561 | + | 4081 | 88 | 19.5 | -21.3 | YP_024681 | 5' arm 3' arm | ||
| 27637 | - | 4603 | 89 | 20 | -24.2 | YP_024681 | 5' arm 3' arm | ||
| 27563 | + | 4684 | 87 | 22 | -25.6 | YP_024682 | 5' arm 3' arm | ||
| 27640 | - | 5317 | 90 | 21 | -24.3 | YP_024682 | 5' arm 3' arm | ||
| 27639 | - | 5185 | 87 | 21 | -27.5 | YP_024682 | 5' arm 3' arm | ||
| 27641 | - | 5517 | 90 | 20 | -19.9 | YP_024682 | 5' arm 3' arm | ||
| 27565 | + | 5078 | 89 | 22 | -23.2 | YP_024682 | 5' arm 3' arm | ||
| 27638 | - | 4859 | 89 | 20.5 | -31 | YP_024682 | 5' arm 3' arm | ||
| 27644 | - | 7207 | 90 | 25.5 | -22.81 | YP_024683 | 5' arm 3' arm | ||
| 27566 | + | 6622 | 87 | 21.5 | -31.7 | YP_024683 | 5' arm 3' arm | ||
| 27567 | + | 6909 | 88 | 21 | -26.5 | YP_024683 | 5' arm 3' arm | ||
| 27568 | + | 7236 | 90 | 19 | -25.3 | YP_024683 | 5' arm 3' arm | ||
| 27643 | - | 7094 | 90 | 19 | -32.3 | YP_024683 | 5' arm 3' arm | ||
| 27570 | + | 7893 | 88 | 23 | -20.1 | YP_024685 | 5' arm 3' arm | ||
| 27645 | - | 7830 | 89 | 20 | -20.2 | YP_024685 | 5' arm 3' arm | ||
| 27569 | + | 7794 | 88 | 21.5 | -26.7 | YP_024685 | 5' arm 3' arm | ||
| 27571 | + | 8049 | 90 | 22.5 | -22.8 | YP_024686 | 5' arm 3' arm | ||
| 27572 | + | 8599 | 89 | 20.5 | -21.7 | YP_024687 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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