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| GenBank Identifier | RefSeq Acc. | Name |
| 48696910 | NC_005882.1 | Burkholderia cenocepacia phage BcepMu |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 27615 | + | 30837 | 84 | 20.5 | -25.3 | YP_024722 | 5' arm 3' arm | ||
| 27617 | + | 31120 | 87 | 22 | -22.9 | YP_024722 | 5' arm 3' arm | ||
| 27612 | + | 30294 | 90 | 19 | -22.2 | YP_024721 | 5' arm 3' arm | ||
| 27613 | + | 30456 | 90 | 22.5 | -29.7 | YP_024721 | 5' arm 3' arm | ||
| 27614 | + | 30649 | 85 | 19.5 | -21.3 | YP_024721 | 5' arm 3' arm | ||
| 27696 | - | 30553 | 90 | 21 | -22.9 | YP_024721 | 5' arm 3' arm | ||
| 27694 | - | 29669 | 87 | 20.5 | -24.7 | YP_024720 | 5' arm 3' arm | ||
| 27695 | - | 30070 | 89 | 23.5 | -22 | YP_024720 | 5' arm 3' arm | ||
| 27693 | - | 29430 | 88 | 21 | -26.1 | YP_024720 | 5' arm 3' arm | ||
| 27692 | - | 29067 | 87 | 22.5 | -29.3 | YP_024720 | 5' arm 3' arm | ||
| 27611 | + | 28904 | 89 | 22.5 | -21.2 | YP_024719 | 5' arm 3' arm | ||
| 27691 | - | 28672 | 89 | 22.5 | -23.1 | YP_024718 | 5' arm 3' arm | ||
| 27610 | + | 28332 | 87 | 19 | -21.4 | YP_024718 | 5' arm 3' arm | ||
| 27687 | - | 28026 | 88 | 22 | -30.5 | YP_024718 | 5' arm 3' arm | ||
| 27688 | - | 28213 | 87 | 21 | -20.6 | YP_024718 | 5' arm 3' arm | ||
| 27690 | - | 28583 | 89 | 22 | -21.9 | YP_024718 | 5' arm 3' arm | ||
| 27689 | - | 28333 | 88 | 20.5 | -30 | YP_024718 | 5' arm 3' arm | ||
| 27605 | + | 26819 | 89 | 19.5 | -21 | YP_024717 | 5' arm 3' arm | ||
| 27606 | + | 26919 | 90 | 22.5 | -25.7 | YP_024717 | 5' arm 3' arm | ||
| 27607 | + | 27010 | 87 | 19.5 | -27 | YP_024717 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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