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| GenBank Identifier | RefSeq Acc. | Name |
| 48696910 | NC_005882.1 | Burkholderia cenocepacia phage BcepMu |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 27705 | - | 35946 | 86 | 19 | -20.7 | YP_024726 | 5' arm 3' arm | ||
| 27627 | + | 35466 | 89 | 20.5 | -24.2 | YP_024726 | 5' arm 3' arm | ||
| 27626 | + | 34510 | 90 | 22.5 | -24.7 | YP_024725 | 5' arm 3' arm | ||
| 27702 | - | 33536 | 90 | 24.5 | -23.7 | YP_024725 | 5' arm 3' arm | ||
| 27703 | - | 33874 | 88 | 20.5 | -21.7 | YP_024725 | 5' arm 3' arm | ||
| 27624 | + | 33392 | 90 | 23 | -22.9 | YP_024725 | 5' arm 3' arm | ||
| 27625 | + | 33787 | 88 | 19.5 | -24.12 | YP_024725 | 5' arm 3' arm | ||
| 27704 | - | 34550 | 87 | 20.5 | -19.6 | YP_024725 | 5' arm 3' arm | ||
| 27700 | - | 32422 | 85 | 21 | -22.1 | YP_024724 | 5' arm 3' arm | ||
| 27622 | + | 32639 | 89 | 20.5 | -23.8 | YP_024724 | 5' arm 3' arm | ||
| 27623 | + | 32760 | 89 | 23 | -19.9 | YP_024724 | 5' arm 3' arm | ||
| 27701 | - | 32522 | 90 | 19.5 | -22.9 | YP_024724 | 5' arm 3' arm | ||
| 27618 | + | 31461 | 89 | 20 | -24.7 | YP_024723 | 5' arm 3' arm | ||
| 27620 | + | 31815 | 90 | 20 | -24.1 | YP_024723 | 5' arm 3' arm | ||
| 27619 | + | 31558 | 88 | 22 | -22.4 | YP_024723 | 5' arm 3' arm | ||
| 27699 | - | 31510 | 89 | 21.5 | -22.1 | YP_024723 | 5' arm 3' arm | ||
| 27621 | + | 32226 | 89 | 22 | -23.9 | YP_024723 | 5' arm 3' arm | ||
| 27617 | + | 31120 | 87 | 22 | -22.9 | YP_024722 | 5' arm 3' arm | ||
| 27615 | + | 30837 | 84 | 20.5 | -25.3 | YP_024722 | 5' arm 3' arm | ||
| 27616 | + | 31025 | 90 | 22 | -21.6 | YP_024722 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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