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| GenBank Identifier | RefSeq Acc. | Name |
| 48696910 | NC_005882.1 | Burkholderia cenocepacia phage BcepMu |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 27555 | + | 172 | 90 | 20 | -37.1 | 5' arm 3' arm | |||
| 27670 | - | 21516 | 90 | 23 | -36.8 | YP_024709 | 5' arm 3' arm | ||
| 27595 | + | 19560 | 90 | 19 | -36.5 | YP_024705 | 5' arm 3' arm | ||
| 27598 | + | 21430 | 86 | 20.5 | -33.8 | YP_024709 | 5' arm 3' arm | ||
| 27643 | - | 7094 | 90 | 19 | -32.3 | YP_024683 | 5' arm 3' arm | ||
| 27663 | - | 17469 | 89 | 22.5 | -32.3 | YP_024703 | 5' arm 3' arm | ||
| 27633 | - | 3280 | 87 | 21.5 | -32.1 | YP_024680 | 5' arm 3' arm | ||
| 27566 | + | 6622 | 87 | 21.5 | -31.7 | YP_024683 | 5' arm 3' arm | ||
| 27638 | - | 4859 | 89 | 20.5 | -31 | YP_024682 | 5' arm 3' arm | ||
| 27665 | - | 18717 | 90 | 22.5 | -30.6 | 5' arm 3' arm | |||
| 27687 | - | 28026 | 88 | 22 | -30.5 | YP_024718 | 5' arm 3' arm | ||
| 27603 | + | 24491 | 90 | 21.5 | -30.2 | 5' arm 3' arm | |||
| 27689 | - | 28333 | 88 | 20.5 | -30 | YP_024718 | 5' arm 3' arm | ||
| 27669 | - | 21342 | 89 | 23 | -29.8 | YP_024708 | 5' arm 3' arm | ||
| 27613 | + | 30456 | 90 | 22.5 | -29.7 | YP_024721 | 5' arm 3' arm | ||
| 27664 | - | 17945 | 89 | 20 | -29.31 | YP_024703 | 5' arm 3' arm | ||
| 27692 | - | 29067 | 87 | 22.5 | -29.3 | YP_024720 | 5' arm 3' arm | ||
| 27677 | - | 24122 | 88 | 21.5 | -29 | YP_024713 | 5' arm 3' arm | ||
| 27608 | + | 27198 | 89 | 20.5 | -28.9 | YP_024717 | 5' arm 3' arm | ||
| 27657 | - | 15478 | 90 | 20.5 | -28.9 | YP_024701 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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