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| GenBank Identifier | RefSeq Acc. | Name |
| 48696910 | NC_005882.1 | Burkholderia cenocepacia phage BcepMu |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 27597 | + | 20475 | 88 | 19 | -19.4 | YP_024707 | 5' arm 3' arm | ||
| 27704 | - | 34550 | 87 | 20.5 | -19.6 | YP_024725 | 5' arm 3' arm | ||
| 27582 | + | 13494 | 90 | 19.5 | -19.6 | YP_024699 | 5' arm 3' arm | ||
| 27659 | - | 16533 | 80 | 20 | -19.7 | YP_024702 | 5' arm 3' arm | ||
| 27674 | - | 23521 | 88 | 21.5 | -19.7 | YP_024712 | 5' arm 3' arm | ||
| 27592 | + | 17943 | 85 | 19.5 | -19.8 | YP_024703 | 5' arm 3' arm | ||
| 27623 | + | 32760 | 89 | 23 | -19.9 | YP_024724 | 5' arm 3' arm | ||
| 27641 | - | 5517 | 90 | 20 | -19.9 | YP_024682 | 5' arm 3' arm | ||
| 27629 | - | 551 | 90 | 21.5 | -19.9 | YP_024674 | 5' arm 3' arm | ||
| 27652 | - | 14128 | 88 | 23 | -20 | YP_024700 | 5' arm 3' arm | ||
| 27570 | + | 7893 | 88 | 23 | -20.1 | YP_024685 | 5' arm 3' arm | ||
| 27631 | - | 1339 | 90 | 20.5 | -20.1 | YP_024676 | 5' arm 3' arm | ||
| 27636 | - | 4174 | 90 | 20 | -20.1 | YP_024681 | 5' arm 3' arm | ||
| 27645 | - | 7830 | 89 | 20 | -20.2 | YP_024685 | 5' arm 3' arm | ||
| 27653 | - | 14403 | 86 | 19.5 | -20.6 | YP_024701 | 5' arm 3' arm | ||
| 27688 | - | 28213 | 87 | 21 | -20.6 | YP_024718 | 5' arm 3' arm | ||
| 27586 | + | 15924 | 89 | 19.5 | -20.6 | YP_024702 | 5' arm 3' arm | ||
| 27558 | + | 2177 | 90 | 20 | -20.7 | YP_024678 | 5' arm 3' arm | ||
| 27705 | - | 35946 | 86 | 19 | -20.7 | YP_024726 | 5' arm 3' arm | ||
| 27574 | + | 9092 | 89 | 22.5 | -20.7 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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