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| GenBank Identifier | RefSeq Acc. | Name |
| 48696910 | NC_005882.1 | Burkholderia cenocepacia phage BcepMu |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 27578 | + | 10739 | 90 | 23.5 | -28.2 | YP_024692 | 5' arm 3' arm | ||
| 27649 | - | 12207 | 89 | 19 | -28.1 | YP_024695 | 5' arm 3' arm | ||
| 27667 | - | 20827 | 87 | 21 | -28.1 | YP_024707 | 5' arm 3' arm | ||
| 27682 | - | 26332 | 90 | 22.5 | -27.9 | YP_024717 | 5' arm 3' arm | ||
| 27639 | - | 5185 | 87 | 21 | -27.5 | YP_024682 | 5' arm 3' arm | ||
| 27556 | + | 1912 | 90 | 26 | -27.1 | YP_024678 | 5' arm 3' arm | ||
| 27607 | + | 27010 | 87 | 19.5 | -27 | YP_024717 | 5' arm 3' arm | ||
| 27589 | + | 17111 | 89 | 21 | -27 | YP_024702 | 5' arm 3' arm | ||
| 27591 | + | 17382 | 87 | 20.5 | -26.8 | YP_024703 | 5' arm 3' arm | ||
| 27569 | + | 7794 | 88 | 21.5 | -26.7 | YP_024685 | 5' arm 3' arm | ||
| 27567 | + | 6909 | 88 | 21 | -26.5 | YP_024683 | 5' arm 3' arm | ||
| 27588 | + | 16957 | 90 | 20 | -26.3 | YP_024702 | 5' arm 3' arm | ||
| 27668 | - | 21221 | 85 | 22.5 | -26.2 | YP_024708 | 5' arm 3' arm | ||
| 27693 | - | 29430 | 88 | 21 | -26.1 | YP_024720 | 5' arm 3' arm | ||
| 27593 | + | 18221 | 88 | 20.5 | -26.1 | YP_024704 | 5' arm 3' arm | ||
| 27557 | + | 2015 | 90 | 21 | -26 | YP_024678 | 5' arm 3' arm | ||
| 27590 | + | 17258 | 89 | 19.5 | -25.9 | YP_024703 | 5' arm 3' arm | ||
| 27672 | - | 22690 | 85 | 21 | -25.9 | YP_024712 | 5' arm 3' arm | ||
| 27686 | - | 27834 | 87 | 20.5 | -25.9 | YP_024717 | 5' arm 3' arm | ||
| 27583 | + | 14414 | 90 | 25.5 | -25.8 | YP_024701 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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