miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27076	+	47961	81	22.5	-23.9	YP_003817		5' arm      3' arm
27077	+	48090	90	19.5	-20.4	YP_003817		5' arm      3' arm
27078	+	48748	89	21.5	-25.6	YP_003818		5' arm      3' arm
27079	+	50414	89	20	-30.4	YP_003819		5' arm      3' arm
27080	+	53654	89	20.5	-21.5	YP_003822		5' arm      3' arm
27081	+	54006	87	21	-26.4	YP_003823		5' arm      3' arm
27082	+	54739	83	19.5	-23.3	YP_003823		5' arm      3' arm
27083	+	55051	78	19.5	-19.7			5' arm      3' arm
27084	+	56269	89	23	-34.1	YP_003824		5' arm      3' arm
27085	+	56525	89	23	-21.1	YP_003824		5' arm      3' arm
27086	+	56789	90	22	-23	YP_003824		5' arm      3' arm
27087	+	59892	89	21.5	-23.2	YP_003827		5' arm      3' arm
27088	+	60057	90	20.5	-19.7	YP_003827		5' arm      3' arm
27089	+	60301	90	19.5	-22.7	YP_003827		5' arm      3' arm
27090	+	66705	89	21.5	-23.4	YP_003831		5' arm      3' arm
27091	+	67028	88	20.5	-22.2	YP_003831		5' arm      3' arm
27092	+	67649	82	20	-22.5	YP_003831		5' arm      3' arm
27093	+	67745	88	22.5	-20.4	YP_003831		5' arm      3' arm
27094	+	68652	89	20.5	-23.9			5' arm      3' arm
27095	+	71276	88	21.5	-24	YP_003834		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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