miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27056	+	34188	85	20	-23.8	YP_003802		5' arm      3' arm
27057	+	36019	89	19.5	-19.6			5' arm      3' arm
27058	+	36538	89	23	-31.1	YP_003806		5' arm      3' arm
27059	+	36834	90	21	-22.8	YP_003808		5' arm      3' arm
27060	+	37484	90	25.5	-27.8	YP_003809		5' arm      3' arm
27061	+	38216	78	20	-27.6	YP_003810		5' arm      3' arm
27062	+	38698	84	22.5	-25.7	YP_003810		5' arm      3' arm
27063	+	39421	86	20.5	-25.6			5' arm      3' arm
27064	+	39787	89	19	-27.4			5' arm      3' arm
27065	+	40673	90	20	-20.3	YP_003814		5' arm      3' arm
27066	+	40862	84	19	-24.4	YP_003814		5' arm      3' arm
27067	+	42349	89	21.5	-24	YP_003815		5' arm      3' arm
27068	+	43274	87	21.5	-21.4	YP_003815		5' arm      3' arm
27069	+	43580	89	22.5	-20	YP_003815		5' arm      3' arm
27070	+	44036	87	20	-21.9	YP_003815		5' arm      3' arm
27071	+	46486	88	20	-25.3	YP_003817		5' arm      3' arm
27072	+	46617	87	22	-19.5	YP_003817		5' arm      3' arm
27073	+	46938	90	19.5	-28.1	YP_003817		5' arm      3' arm
27074	+	47089	89	21.5	-28.7	YP_003817		5' arm      3' arm
27075	+	47218	85	22.5	-28.7	YP_003817		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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