miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
66476549 NC_007016.1 Macaca fuscata rhadinovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
32068 + 255 88 21 -30.8 5' arm      3' arm
32069 + 351 88 21 -30.8 5' arm      3' arm
32070 + 813 90 21 -29.9 YP_238304 5' arm      3' arm
32071 + 9933 90 22 -26 YP_238313 5' arm      3' arm
32072 + 10192 82 19.5 -19.9 YP_238313 5' arm      3' arm
32073 + 14108 90 23.5 -31.7 YP_238317 5' arm      3' arm
32074 + 14847 88 20 -28.5 YP_238319 5' arm      3' arm
32075 + 15711 86 21.5 -23 YP_238317 5' arm      3' arm
32076 + 16235 90 19 -22.8 5' arm      3' arm
32077 + 16877 90 19.5 -28.8 YP_238321 5' arm      3' arm
32078 + 17214 90 21 -19.7 YP_238322 5' arm      3' arm
32079 + 17717 88 20.5 -23.7 YP_238323 5' arm      3' arm
32080 + 17863 89 23.5 -24.95 YP_238323 5' arm      3' arm
32081 + 21811 84 19.5 -19.5 YP_238328 5' arm      3' arm
32082 + 22879 88 19 -26.4 YP_238330 5' arm      3' arm
32083 + 22990 87 25.5 -34.3 5' arm      3' arm
32084 + 25791 90 21.5 -20.2 YP_238331 5' arm      3' arm
32085 + 26566 90 20.5 -19.7 YP_238332 5' arm      3' arm
32086 + 26731 86 19.5 -27.8 YP_238332 5' arm      3' arm
32087 + 27660 89 22.5 -23.2 YP_238333 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.