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| GenBank Identifier | RefSeq Acc. | Name |
| 48697190 | NC_005887.1 | Burkholderia cepacia complex phage BcepC6B |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 28121 | - | 7884 | 90 | 19.5 | -22 | YP_024930 | 5' arm 3' arm | ||
| 28120 | - | 7564 | 86 | 20.5 | -21.9 | YP_024929 | 5' arm 3' arm | ||
| 28119 | - | 7401 | 89 | 22.5 | -28.3 | YP_024929 | 5' arm 3' arm | ||
| 28118 | - | 6946 | 89 | 20 | -26.1 | YP_024928 | 5' arm 3' arm | ||
| 28117 | - | 6618 | 90 | 24 | -24.1 | YP_024928 | 5' arm 3' arm | ||
| 28116 | - | 6356 | 89 | 21.5 | -26.4 | YP_024928 | 5' arm 3' arm | ||
| 28115 | - | 6234 | 90 | 21 | -25.4 | YP_024928 | 5' arm 3' arm | ||
| 28114 | - | 5331 | 90 | 21.5 | -22.6 | YP_024926 | 5' arm 3' arm | ||
| 28113 | - | 5224 | 90 | 20.5 | -26 | YP_024926 | 5' arm 3' arm | ||
| 28112 | - | 5117 | 90 | 21 | -30.2 | YP_024926 | 5' arm 3' arm | ||
| 28111 | - | 4877 | 87 | 21 | -20 | YP_024926 | 5' arm 3' arm | ||
| 28110 | - | 4686 | 89 | 22 | -25.5 | YP_024925 | 5' arm 3' arm | ||
| 28109 | - | 4511 | 90 | 21.5 | -23.6 | YP_024925 | 5' arm 3' arm | ||
| 28108 | - | 3956 | 88 | 20.5 | -23.8 | YP_024925 | 5' arm 3' arm | ||
| 28107 | - | 3645 | 90 | 21.5 | -24.7 | YP_024925 | 5' arm 3' arm | ||
| 28106 | - | 3078 | 90 | 23 | -28.1 | YP_024924 | 5' arm 3' arm | ||
| 28105 | - | 2797 | 90 | 24 | -24.1 | 5' arm 3' arm | |||
| 28104 | - | 1711 | 87 | 23.5 | -26.8 | YP_024923 | 5' arm 3' arm | ||
| 28103 | + | 42298 | 90 | 20.5 | -21.4 | YP_024966 | 5' arm 3' arm | ||
| 28102 | + | 42166 | 87 | 23 | -27.1 | YP_024966 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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