miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
28126	-	11631	90	21	-25	YP_024934		5' arm      3' arm
28127	-	11771	85	21	-22.7	YP_024934		5' arm      3' arm
28131	-	13583	89	19.5	-23.8	YP_024935		5' arm      3' arm
28021	+	13977	90	20.5	-25.6	YP_024935		5' arm      3' arm
28130	-	13021	90	23	-20.9	YP_024935		5' arm      3' arm
28018	+	12325	85	19	-34.6	YP_024935		5' arm      3' arm
28128	-	12473	90	23	-21.6	YP_024935		5' arm      3' arm
28132	-	13690	87	23	-33.4	YP_024935		5' arm      3' arm
28019	+	13562	90	21	-20.3	YP_024935		5' arm      3' arm
28129	-	12883	90	22.5	-30	YP_024935		5' arm      3' arm
28020	+	13833	90	19	-23.7	YP_024935		5' arm      3' arm
28139	-	16375	87	21.5	-20.8	YP_024936		5' arm      3' arm
28026	+	15399	88	19	-19.6	YP_024936		5' arm      3' arm
28134	-	14363	89	20	-24.4	YP_024936		5' arm      3' arm
28024	+	14329	87	20	-25.6	YP_024936		5' arm      3' arm
28137	-	16109	89	21.5	-24.6	YP_024936		5' arm      3' arm
28138	-	16231	86	24	-25.1	YP_024936		5' arm      3' arm
28136	-	15410	89	22.5	-21	YP_024936		5' arm      3' arm
28135	-	15314	87	22	-30.4	YP_024936		5' arm      3' arm
28023	+	14235	90	21.5	-22.8	YP_024936		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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