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| GenBank Identifier | RefSeq Acc. | Name |
| 48697190 | NC_005887.1 | Burkholderia cepacia complex phage BcepC6B |
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| ID |
strand
|
start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 28111 | - | 4877 | 87 | 21 | -20 | YP_024926 | 5' arm 3' arm | ||
| 28125 | - | 10064 | 89 | 22 | -20.2 | YP_024932 | 5' arm 3' arm | ||
| 28180 | - | 40823 | 88 | 19 | -23.5 | YP_024966 | 5' arm 3' arm | ||
| 28173 | - | 34489 | 89 | 19.5 | -28 | 5' arm 3' arm | |||
| 28171 | - | 32798 | 90 | 20.5 | -26.7 | YP_024954 | 5' arm 3' arm | ||
| 28168 | - | 31338 | 90 | 20 | -24.9 | YP_024952 | 5' arm 3' arm | ||
| 28163 | - | 28464 | 90 | 21.5 | -24.9 | YP_024950 | 5' arm 3' arm | ||
| 28153 | - | 24013 | 90 | 21 | -32.2 | YP_024945 | 5' arm 3' arm | ||
| 28158 | - | 26036 | 89 | 19 | -24.1 | 5' arm 3' arm | |||
| 28114 | - | 5331 | 90 | 21.5 | -22.6 | YP_024926 | 5' arm 3' arm | ||
| 28148 | - | 21287 | 89 | 21.5 | -21 | YP_024939 | 5' arm 3' arm | ||
| 28144 | - | 18485 | 87 | 20 | -21.4 | YP_024937 | 5' arm 3' arm | ||
| 28132 | - | 13690 | 87 | 23 | -33.4 | YP_024935 | 5' arm 3' arm | ||
| 28126 | - | 11631 | 90 | 21 | -25 | YP_024934 | 5' arm 3' arm | ||
| 28117 | - | 6618 | 90 | 24 | -24.1 | YP_024928 | 5' arm 3' arm | ||
| 28122 | - | 8115 | 89 | 21.5 | -27.3 | YP_024931 | 5' arm 3' arm | ||
| 28123 | - | 9150 | 88 | 20.5 | -20.5 | YP_024932 | 5' arm 3' arm | ||
| 28104 | - | 1711 | 87 | 23.5 | -26.8 | YP_024923 | 5' arm 3' arm | ||
| 28066 | + | 30365 | 90 | 22 | -29.5 | YP_024952 | 5' arm 3' arm | ||
| 28060 | + | 28999 | 86 | 22 | -20.5 | YP_024951 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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