miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31721	+	8559	87	23	-23.3	YP_223937		5' arm      3' arm
31717	+	4655	90	19	-22.6	YP_223931		5' arm      3' arm
31716	+	3361	89	19.5	-21.1	YP_223931		5' arm      3' arm
31715	+	3254	87	19.5	-27.3	YP_223931		5' arm      3' arm
31714	+	2002	90	20	-23	YP_223929		5' arm      3' arm
31726	+	10825	87	19.5	-19.7	YP_223939		5' arm      3' arm
31733	+	17638	89	20.5	-29	YP_223952		5' arm      3' arm
31738	+	23037	90	19.5	-19.4	YP_223957		5' arm      3' arm
31743	+	25748	89	20	-20.6	YP_223965		5' arm      3' arm
31744	+	26288	89	21.5	-20.5	YP_223967		5' arm      3' arm
31742	+	24914	90	22.5	-22.6	YP_223962		5' arm      3' arm
31735	+	19880	89	19	-22.7	YP_223954		5' arm      3' arm
31734	+	19566	86	20	-21.7	YP_223954		5' arm      3' arm
31737	+	21589	88	21	-28.46	YP_223957		5' arm      3' arm
31736	+	20187	90	21.5	-26	YP_223954		5' arm      3' arm
31732	+	17131	90	19	-23.8	YP_223951		5' arm      3' arm
31731	+	17018	89	19	-22.1	YP_223950		5' arm      3' arm
31728	+	14276	90	19	-26.8	YP_223946		5' arm      3' arm
31730	+	15810	90	19.5	-25.7	YP_223948		5' arm      3' arm
31729	+	14505	89	19.5	-22	YP_223947		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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