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GenBank Identifier | RefSeq Acc. | Name |
55733720 | NC_006444.1 | Gremmeniella abietina RNA virus MS2 RNA 1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
30375 | + | 925 | 86 | 23.5 | -20.1 | YP_138540 | 5' arm 3' arm | ||
30376 | + | 1415 | 88 | 20 | -20.2 | YP_138540 | 5' arm 3' arm | ||
30377 | - | 388 | 89 | 19.5 | -24.4 | YP_138540 | 5' arm 3' arm | ||
30378 | - | 884 | 90 | 20.5 | -19.5 | YP_138540 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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