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GenBank Identifier | RefSeq Acc. | Name |
9630386 | NC_001900.1 | Mycobacteriophage D29 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
7288 | - | 10229 | 87 | 20.5 | -25.1 | NP_046829 | 5' arm 3' arm | ||
7174 | + | 10725 | 82 | 20 | -24.7 | NP_046830 | 5' arm 3' arm | ||
7289 | - | 11302 | 80 | 22 | -24.7 | NP_046830 | 5' arm 3' arm | ||
7175 | + | 11042 | 90 | 20.5 | -25.4 | NP_046830 | 5' arm 3' arm | ||
7176 | + | 11925 | 81 | 19 | -20.6 | NP_046831 | 5' arm 3' arm | ||
7290 | - | 11965 | 90 | 19 | -19.4 | NP_046831 | 5' arm 3' arm | ||
7291 | - | 12076 | 89 | 21.5 | -19.9 | NP_046831 | 5' arm 3' arm | ||
7177 | + | 12235 | 88 | 19 | -31.2 | NP_046832 | 5' arm 3' arm | ||
7179 | + | 12795 | 87 | 22.5 | -23.91 | NP_046832 | 5' arm 3' arm | ||
7295 | - | 12742 | 85 | 21 | -24.6 | NP_046832 | 5' arm 3' arm | ||
7293 | - | 12441 | 89 | 20.5 | -25.2 | NP_046832 | 5' arm 3' arm | ||
7294 | - | 12582 | 90 | 23 | -19.4 | NP_046832 | 5' arm 3' arm | ||
7292 | - | 12219 | 87 | 20.5 | -21.6 | NP_046832 | 5' arm 3' arm | ||
7296 | - | 13011 | 90 | 19 | -21.4 | NP_046832 | 5' arm 3' arm | ||
7178 | + | 12550 | 87 | 19.5 | -23.9 | NP_046832 | 5' arm 3' arm | ||
7297 | - | 13255 | 83 | 22.5 | -25.8 | NP_046833 | 5' arm 3' arm | ||
7298 | - | 13414 | 90 | 19.5 | -22 | NP_046834 | 5' arm 3' arm | ||
7180 | + | 13358 | 90 | 21 | -24 | NP_046834 | 5' arm 3' arm | ||
7299 | - | 13775 | 90 | 23 | -20.8 | NP_046835 | 5' arm 3' arm | ||
7181 | + | 13720 | 86 | 19.5 | -21.5 | NP_046835 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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