miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
7275	-	6385	89	21.5	-23.2	NP_046826		5' arm      3' arm
7277	-	7170	89	21	-20.4	NP_046827		5' arm      3' arm
7276	-	6801	87	20	-20.8	NP_046827		5' arm      3' arm
7167	+	6690	90	19	-23.9	NP_046827		5' arm      3' arm
7278	-	7444	87	20	-24.6	NP_046828		5' arm      3' arm
7281	-	8232	86	24	-30.3	NP_046828		5' arm      3' arm
7171	+	8552	90	21	-24.2	NP_046828		5' arm      3' arm
7170	+	7920	90	19	-20.86	NP_046828		5' arm      3' arm
7284	-	9190	90	19	-24.5	NP_046828		5' arm      3' arm
7282	-	8366	88	21	-22.1	NP_046828		5' arm      3' arm
7283	-	8527	90	21.5	-25.8	NP_046828		5' arm      3' arm
7280	-	8109	90	23	-19.5	NP_046828		5' arm      3' arm
7169	+	7499	89	20	-24.5	NP_046828		5' arm      3' arm
7168	+	7358	87	20.5	-34.1	NP_046828		5' arm      3' arm
7279	-	8009	90	19	-26.4	NP_046828		5' arm      3' arm
7286	-	9871	90	20	-25.5	NP_046829		5' arm      3' arm
7173	+	9783	87	20.5	-20.4	NP_046829		5' arm      3' arm
7172	+	9343	87	21	-31.1	NP_046829		5' arm      3' arm
7288	-	10229	87	20.5	-25.1	NP_046829		5' arm      3' arm
7285	-	9327	86	24.5	-27.6	NP_046829		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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