miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
7167	+	6690	90	19	-23.9	NP_046827		5' arm      3' arm
7170	+	7920	90	19	-20.86	NP_046828		5' arm      3' arm
7179	+	12795	87	22.5	-23.91	NP_046832		5' arm      3' arm
7180	+	13358	90	21	-24	NP_046834		5' arm      3' arm
7173	+	9783	87	20.5	-20.4	NP_046829		5' arm      3' arm
7175	+	11042	90	20.5	-25.4	NP_046830		5' arm      3' arm
7174	+	10725	82	20	-24.7	NP_046830		5' arm      3' arm
7178	+	12550	87	19.5	-23.9	NP_046832		5' arm      3' arm
7181	+	13720	86	19.5	-21.5	NP_046835		5' arm      3' arm
7176	+	11925	81	19	-20.6	NP_046831		5' arm      3' arm
7177	+	12235	88	19	-31.2	NP_046832		5' arm      3' arm
7184	+	17504	90	23	-20.4	NP_046842		5' arm      3' arm
7186	+	18254	89	23	-22.3	NP_046842		5' arm      3' arm
7185	+	17740	87	20	-21.9	NP_046842		5' arm      3' arm
7187	+	18412	88	19.5	-20.5	NP_046842		5' arm      3' arm
7182	+	15382	89	19	-23.2	NP_046839		5' arm      3' arm
7183	+	16207	90	19	-24	NP_046841		5' arm      3' arm
7194	+	22607	89	22.5	-21	NP_046847		5' arm      3' arm
7191	+	21230	89	22	-25.3	NP_046844		5' arm      3' arm
7193	+	21922	90	21	-22.6	NP_046845		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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