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GenBank Identifier | RefSeq Acc. | Name |
20564172 | NC_003823.1 | Ustilago maydis virus H1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
15233 | + | 199 | 86 | 19 | -20.5 | 5' arm 3' arm | |||
15234 | + | 3429 | 89 | 19.5 | -23.16 | NP_620728 | 5' arm 3' arm | ||
15235 | + | 3695 | 89 | 25.5 | -21 | NP_620728 | 5' arm 3' arm | ||
15236 | - | 2378 | 87 | 20.5 | -24.6 | NP_620728 | 5' arm 3' arm | ||
15237 | - | 3325 | 89 | 20 | -19.5 | NP_620728 | 5' arm 3' arm | ||
15238 | - | 4559 | 90 | 23.5 | -25.7 | NP_620728 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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