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GenBank Identifier | RefSeq Acc. | Name |
62327307 | NC_006940.1 | Bacteriophage KS7 virion |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
31919 | + | 38 | 90 | 20 | -23.5 | 5' arm 3' arm | |||
31920 | + | 2587 | 87 | 24.5 | -26.2 | YP_224024 | 5' arm 3' arm | ||
31921 | + | 4770 | 89 | 20 | -20 | YP_224029 | 5' arm 3' arm | ||
31922 | + | 7667 | 84 | 24 | -25.2 | YP_224033 | 5' arm 3' arm | ||
31923 | + | 12080 | 90 | 21.5 | -23.2 | YP_224037 | 5' arm 3' arm | ||
31924 | + | 12453 | 90 | 21 | -32.6 | 5' arm 3' arm | |||
31925 | + | 19819 | 84 | 21 | -22 | YP_224056 | 5' arm 3' arm | ||
31926 | + | 24801 | 90 | 19 | -27.5 | YP_224063 | 5' arm 3' arm | ||
31927 | + | 25917 | 81 | 23.5 | -21.6 | YP_224063 | 5' arm 3' arm | ||
31928 | + | 33795 | 86 | 23.5 | -19.4 | YP_224073 | 5' arm 3' arm | ||
31929 | + | 35500 | 90 | 21 | -23.6 | 5' arm 3' arm | |||
31930 | + | 36233 | 88 | 19 | -19.6 | YP_308655 | 5' arm 3' arm | ||
31931 | + | 37966 | 86 | 21 | -23.3 | YP_308656 | 5' arm 3' arm | ||
31932 | + | 38674 | 89 | 21 | -22.1 | YP_308656 | 5' arm 3' arm | ||
31933 | + | 38777 | 89 | 20 | -20.6 | YP_308656 | 5' arm 3' arm | ||
31934 | + | 40301 | 83 | 20 | -22 | 5' arm 3' arm | |||
31935 | - | 691 | 90 | 21.5 | -19.4 | 5' arm 3' arm | |||
31936 | - | 2174 | 89 | 19 | -22.5 | YP_224024 | 5' arm 3' arm | ||
31937 | - | 4669 | 87 | 22 | -27.5 | YP_224029 | 5' arm 3' arm | ||
31938 | - | 7323 | 90 | 23.5 | -24 | YP_224033 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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