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| GenBank Identifier | RefSeq Acc. | Name |
| 9790292 | NC_001543.1 | Rabbit hemorrhagic disease virus-FRG |
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| ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF |
Known viral miRNA
|
Match to own genomic region# | Target prediction with RNAhybrid |
| 3274 | + | 1022 | 88 | 25 | -24.3 | NP_062875 | 5' arm 3' arm | ||
| 3281 | - | 1613 | 89 | 19.5 | -19.8 | NP_062875 | 5' arm 3' arm | ||
| 3280 | - | 1230 | 89 | 20 | -24.1 | NP_062875 | 5' arm 3' arm | ||
| 3278 | - | 178 | 82 | 20.5 | -20.4 | NP_062875 | 5' arm 3' arm | ||
| 3282 | - | 6474 | 89 | 19 | -24.4 | NP_062875 | 5' arm 3' arm | ||
| 3283 | - | 6790 | 90 | 24 | -22.3 | NP_062875 | 5' arm 3' arm | ||
| 3277 | + | 4026 | 89 | 21.5 | -22.6 | NP_062875 | 5' arm 3' arm | ||
| 3275 | + | 1142 | 89 | 21.5 | -21 | NP_062875 | 5' arm 3' arm | ||
| 3276 | + | 3592 | 90 | 25 | -28.3 | NP_062875 | 5' arm 3' arm | ||
| 3279 | - | 383 | 87 | 19 | -25.6 | NP_062875 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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